A B C D E F G H I J M N O P Q R S T U V X Y Z
All Classes All Packages
All Classes All Packages
All Classes All Packages
A
- ABINITFormat - Class in org.openscience.cdk.io.formats
- ABINITFormat() - Constructor for class org.openscience.cdk.io.formats.ABINITFormat
- AbstractResourceFormat - Class in org.openscience.cdk.io.formats
-
An abstract class providing
AbstractResourceFormat.hashCode()andAbstractResourceFormat.equals(java.lang.Object)forIResourceFormats. - AbstractResourceFormat() - Constructor for class org.openscience.cdk.io.formats.AbstractResourceFormat
- Aces2Format - Class in org.openscience.cdk.io.formats
- Aces2Format() - Constructor for class org.openscience.cdk.io.formats.Aces2Format
- ADFFormat - Class in org.openscience.cdk.io.formats
- ADFFormat() - Constructor for class org.openscience.cdk.io.formats.ADFFormat
- AlchemyFormat - Class in org.openscience.cdk.io.formats
- AlchemyFormat() - Constructor for class org.openscience.cdk.io.formats.AlchemyFormat
B
- BGFFormat - Class in org.openscience.cdk.io.formats
- BGFFormat() - Constructor for class org.openscience.cdk.io.formats.BGFFormat
- BSFormat - Class in org.openscience.cdk.io.formats
-
See here.
- BSFormat() - Constructor for class org.openscience.cdk.io.formats.BSFormat
C
- CacaoCartesianFormat - Class in org.openscience.cdk.io.formats
-
See here.
- CacaoCartesianFormat() - Constructor for class org.openscience.cdk.io.formats.CacaoCartesianFormat
- CacaoInternalFormat - Class in org.openscience.cdk.io.formats
-
See here.
- CacaoInternalFormat() - Constructor for class org.openscience.cdk.io.formats.CacaoInternalFormat
- CACheFormat - Class in org.openscience.cdk.io.formats
- CACheFormat() - Constructor for class org.openscience.cdk.io.formats.CACheFormat
- CDKOWLFormat - Class in org.openscience.cdk.io.formats
-
Serializes a CDK model into the Web Ontology Language using the N3 format.
- CDKOWLFormat() - Constructor for class org.openscience.cdk.io.formats.CDKOWLFormat
- CDKSourceCodeFormat - Class in org.openscience.cdk.io.formats
- CDKSourceCodeFormat() - Constructor for class org.openscience.cdk.io.formats.CDKSourceCodeFormat
- Chem3D_Cartesian_1Format - Class in org.openscience.cdk.io.formats
- Chem3D_Cartesian_1Format() - Constructor for class org.openscience.cdk.io.formats.Chem3D_Cartesian_1Format
- Chem3D_Cartesian_2Format - Class in org.openscience.cdk.io.formats
- Chem3D_Cartesian_2Format() - Constructor for class org.openscience.cdk.io.formats.Chem3D_Cartesian_2Format
- ChemDrawFormat - Class in org.openscience.cdk.io.formats
- ChemDrawFormat() - Constructor for class org.openscience.cdk.io.formats.ChemDrawFormat
- ChemtoolFormat - Class in org.openscience.cdk.io.formats
-
See here.
- ChemtoolFormat() - Constructor for class org.openscience.cdk.io.formats.ChemtoolFormat
- CIFFormat - Class in org.openscience.cdk.io.formats
- CIFFormat() - Constructor for class org.openscience.cdk.io.formats.CIFFormat
- CMLFormat - Class in org.openscience.cdk.io.formats
-
See here.
- CMLFormat() - Constructor for class org.openscience.cdk.io.formats.CMLFormat
- CMLRSSFormat - Class in org.openscience.cdk.io.formats
- CMLRSSFormat() - Constructor for class org.openscience.cdk.io.formats.CMLRSSFormat
- CRK2DFormat - Class in org.openscience.cdk.io.formats
-
See here.
- CRK2DFormat() - Constructor for class org.openscience.cdk.io.formats.CRK2DFormat
- CRK3DFormat - Class in org.openscience.cdk.io.formats
-
See here.
- CRK3DFormat() - Constructor for class org.openscience.cdk.io.formats.CRK3DFormat
- CrystClustFormat - Class in org.openscience.cdk.io.formats
- CrystClustFormat() - Constructor for class org.openscience.cdk.io.formats.CrystClustFormat
- CTXFormat - Class in org.openscience.cdk.io.formats
- CTXFormat() - Constructor for class org.openscience.cdk.io.formats.CTXFormat
D
- DaltonFormat - Class in org.openscience.cdk.io.formats
- DaltonFormat() - Constructor for class org.openscience.cdk.io.formats.DaltonFormat
- DataFeatures - Class in org.openscience.cdk.tools
-
Class with constants for possible data features defined in the a Data Feature Ontology.
- DataFeatures() - Constructor for class org.openscience.cdk.tools.DataFeatures
- DMol3Format - Class in org.openscience.cdk.io.formats
- DMol3Format() - Constructor for class org.openscience.cdk.io.formats.DMol3Format
- DOCK5Format - Class in org.openscience.cdk.io.formats
-
See here.
- DOCK5Format() - Constructor for class org.openscience.cdk.io.formats.DOCK5Format
E
- equals(Object) - Method in class org.openscience.cdk.io.formats.AbstractResourceFormat
F
- FenskeHall_ZMatrixFormat - Class in org.openscience.cdk.io.formats
- FenskeHall_ZMatrixFormat() - Constructor for class org.openscience.cdk.io.formats.FenskeHall_ZMatrixFormat
- FingerprintFormat - Class in org.openscience.cdk.io.formats
- FingerprintFormat() - Constructor for class org.openscience.cdk.io.formats.FingerprintFormat
- FormatFactory - Class in org.openscience.cdk.io
-
A factory for recognizing chemical file formats.
- FormatFactory() - Constructor for class org.openscience.cdk.io.FormatFactory
-
Constructs a ReaderFactory which tries to detect the format in the first 65536 chars.
- FormatFactory(int) - Constructor for class org.openscience.cdk.io.FormatFactory
-
Constructs a ReaderFactory which tries to detect the format in the first given number of chars.
G
- GamessFormat - Class in org.openscience.cdk.io.formats
-
See here.
- GamessFormat() - Constructor for class org.openscience.cdk.io.formats.GamessFormat
- Gaussian03Format - Class in org.openscience.cdk.io.formats
-
See here.
- Gaussian03Format() - Constructor for class org.openscience.cdk.io.formats.Gaussian03Format
- Gaussian90Format - Class in org.openscience.cdk.io.formats
- Gaussian90Format() - Constructor for class org.openscience.cdk.io.formats.Gaussian90Format
- Gaussian92Format - Class in org.openscience.cdk.io.formats
- Gaussian92Format() - Constructor for class org.openscience.cdk.io.formats.Gaussian92Format
- Gaussian94Format - Class in org.openscience.cdk.io.formats
- Gaussian94Format() - Constructor for class org.openscience.cdk.io.formats.Gaussian94Format
- Gaussian95Format - Class in org.openscience.cdk.io.formats
- Gaussian95Format() - Constructor for class org.openscience.cdk.io.formats.Gaussian95Format
- Gaussian98Format - Class in org.openscience.cdk.io.formats
- Gaussian98Format() - Constructor for class org.openscience.cdk.io.formats.Gaussian98Format
- GaussianInputFormat - Class in org.openscience.cdk.io.formats
-
See here.
- GaussianInputFormat() - Constructor for class org.openscience.cdk.io.formats.GaussianInputFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.ABINITFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.Aces2Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.ADFFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.AlchemyFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.BGFFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.BSFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CacaoCartesianFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CacaoInternalFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CACheFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CDKOWLFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CDKSourceCodeFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_1Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_2Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.ChemDrawFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.ChemtoolFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CIFFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CMLFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CMLRSSFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CRK2DFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CRK3DFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CrystClustFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.CTXFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.DaltonFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.DMol3Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.DOCK5Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.FenskeHall_ZMatrixFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.FingerprintFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.GamessFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.Gaussian03Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.Gaussian90Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.Gaussian92Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.Gaussian94Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.Gaussian95Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.Gaussian98Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.GaussianInputFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.GhemicalMMFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.GhemicalSPMFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.GROMOS96Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.HINFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.INChIFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.INChIPlainTextFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.JaguarFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.JMEFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.MacroModelFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.MDLFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.MDLRXNFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.MDLRXNV2000Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MDLRXNV3000Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MDLV2000Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MDLV3000Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MMODFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.Mol2Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MOPAC2002Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MOPAC2007Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MOPAC2009Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MOPAC2012Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MOPAC7Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MOPAC7InputFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.MOPAC93Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MOPAC97Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.MoSSOutputFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.MPQCFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.NWChemFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PCModelFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PDBFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PDBMLFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PMPFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.POVRayFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PQSChemFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PubChemASNFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PubChemFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.QChemFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.RawCopyFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.RGroupQueryFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.SDFFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.ShelXFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.SMARTSFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.SMILESFIXFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.SMILESFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.SpartanFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.SVGFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.SybylDescriptorFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.TinkerMM2Format
- getFormatName() - Method in class org.openscience.cdk.io.formats.TinkerXYZFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.TurboMoleFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.UniChemXYZFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.VASPFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.ViewmolFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.XEDFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.XYZFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.YasaraFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.ZindoFormat
- getFormatName() - Method in class org.openscience.cdk.io.formats.ZMatrixFormat
- getFormats() - Method in class org.openscience.cdk.io.FormatFactory
-
Returns the list of recognizable formats.
- getInstance() - Static method in class org.openscience.cdk.io.formats.ABINITFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.Aces2Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.ADFFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.AlchemyFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.BGFFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.BSFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CacaoCartesianFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CacaoInternalFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CACheFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CDKOWLFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CDKSourceCodeFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_1Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_2Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.ChemDrawFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.ChemtoolFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CIFFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CMLFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CMLRSSFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CRK2DFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CRK3DFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CrystClustFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.CTXFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.DaltonFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.DMol3Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.DOCK5Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.FenskeHall_ZMatrixFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.FingerprintFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.GamessFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.Gaussian03Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.Gaussian90Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.Gaussian92Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.Gaussian94Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.Gaussian95Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.Gaussian98Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.GaussianInputFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.GhemicalMMFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.GhemicalSPMFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.GROMOS96Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.HINFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.INChIFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.INChIPlainTextFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.JaguarFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.JMEFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.MacroModelFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.MDLFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.MDLRXNFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.MDLRXNV2000Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MDLRXNV3000Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MDLV2000Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MDLV3000Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MMODFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.Mol2Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MOPAC2002Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MOPAC2007Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MOPAC2009Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MOPAC2012Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MOPAC7Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MOPAC7InputFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.MOPAC93Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MOPAC97Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.MoSSOutputFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.MPQCFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.NWChemFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PCModelFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PDBFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PDBMLFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PMPFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.POVRayFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PQSChemFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PubChemASNFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PubChemFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.QChemFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.RawCopyFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.RGroupQueryFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.SDFFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.ShelXFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.SMARTSFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.SMILESFIXFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.SMILESFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.SpartanFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.SVGFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.SybylDescriptorFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.TinkerMM2Format
- getInstance() - Static method in class org.openscience.cdk.io.formats.TinkerXYZFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.TurboMoleFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.UniChemXYZFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.VASPFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.ViewmolFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.XEDFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.XYZFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.YasaraFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.ZindoFormat
- getInstance() - Static method in class org.openscience.cdk.io.formats.ZMatrixFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.ABINITFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.Aces2Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.ADFFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.AlchemyFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.BGFFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.BSFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CacaoCartesianFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CacaoInternalFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CACheFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CDKOWLFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CDKSourceCodeFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_1Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_2Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.ChemDrawFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.ChemtoolFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CIFFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CMLFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CMLRSSFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CRK2DFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CRK3DFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CrystClustFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.CTXFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.DaltonFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.DMol3Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.DOCK5Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.FenskeHall_ZMatrixFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.FingerprintFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.GamessFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.Gaussian03Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.Gaussian90Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.Gaussian92Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.Gaussian94Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.Gaussian95Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.Gaussian98Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.GaussianInputFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.GhemicalMMFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.GhemicalSPMFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.GROMOS96Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.HINFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.INChIFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.INChIPlainTextFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.JaguarFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.JMEFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MacroModelFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MDLFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MDLRXNFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MDLRXNV2000Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MDLRXNV3000Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MDLV2000Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MDLV3000Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MMODFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.Mol2Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MOPAC2002Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MOPAC2007Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MOPAC2009Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MOPAC2012Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MOPAC7Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MOPAC7InputFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MOPAC93Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MOPAC97Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MoSSOutputFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.MPQCFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.NWChemFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PCModelFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PDBFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PDBMLFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PMPFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.POVRayFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PQSChemFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PubChemASNFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PubChemFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.QChemFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.RawCopyFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.RGroupQueryFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.SDFFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.ShelXFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.SMARTSFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.SMILESFIXFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.SMILESFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.SpartanFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.SVGFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.SybylDescriptorFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.TinkerMM2Format
- getMIMEType() - Method in class org.openscience.cdk.io.formats.TinkerXYZFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.TurboMoleFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.UniChemXYZFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.VASPFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.ViewmolFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.XEDFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.XYZFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.YasaraFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.ZindoFormat
- getMIMEType() - Method in class org.openscience.cdk.io.formats.ZMatrixFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.ABINITFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.Aces2Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.ADFFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.AlchemyFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.BGFFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.BSFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CacaoCartesianFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CacaoInternalFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CACheFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CDKOWLFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CDKSourceCodeFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_1Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_2Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.ChemDrawFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.ChemtoolFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CIFFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CMLFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CMLRSSFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CRK2DFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CRK3DFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CrystClustFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.CTXFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.DaltonFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.DMol3Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.DOCK5Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.FenskeHall_ZMatrixFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.FingerprintFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.GamessFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.Gaussian03Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.Gaussian90Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.Gaussian92Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.Gaussian94Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.Gaussian95Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.Gaussian98Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.GaussianInputFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.GhemicalMMFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.GhemicalSPMFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.GROMOS96Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.HINFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.INChIFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.INChIPlainTextFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.JaguarFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.JMEFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MacroModelFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MDLFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MDLRXNFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MDLRXNV2000Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MDLRXNV3000Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MDLV2000Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MDLV3000Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MMODFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.Mol2Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MOPAC2002Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MOPAC2007Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MOPAC2009Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MOPAC2012Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MOPAC7Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MOPAC7InputFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MOPAC93Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MOPAC97Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MoSSOutputFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.MPQCFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.NWChemFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PCModelFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PDBFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PDBMLFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PMPFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.POVRayFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PQSChemFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PubChemASNFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PubChemFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.QChemFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.RawCopyFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.RGroupQueryFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.SDFFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.ShelXFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.SMARTSFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.SMILESFIXFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.SMILESFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.SpartanFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.SVGFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.SybylDescriptorFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.TinkerMM2Format
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.TinkerXYZFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.TurboMoleFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.UniChemXYZFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.VASPFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.ViewmolFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.XEDFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.XYZFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.YasaraFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.ZindoFormat
- getNameExtensions() - Method in class org.openscience.cdk.io.formats.ZMatrixFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.ABINITFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.Aces2Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.ADFFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.AlchemyFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.BGFFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.BSFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CacaoCartesianFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CacaoInternalFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CACheFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CDKOWLFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CDKSourceCodeFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_1Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_2Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.ChemDrawFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.ChemtoolFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CIFFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CMLFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CMLRSSFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CRK2DFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CRK3DFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CrystClustFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.CTXFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.DaltonFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.DMol3Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.DOCK5Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.FenskeHall_ZMatrixFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.FingerprintFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.GamessFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.Gaussian03Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.Gaussian90Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.Gaussian92Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.Gaussian94Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.Gaussian95Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.Gaussian98Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.GaussianInputFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.GhemicalMMFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.GhemicalSPMFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.GROMOS96Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.HINFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.INChIFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.INChIPlainTextFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.JaguarFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.JMEFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MacroModelFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MDLFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MDLRXNFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MDLRXNV2000Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MDLRXNV3000Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MDLV2000Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MDLV3000Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MMODFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.Mol2Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MOPAC2002Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MOPAC2007Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MOPAC2009Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MOPAC2012Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MOPAC7Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MOPAC7InputFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MOPAC93Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MOPAC97Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MoSSOutputFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.MPQCFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.NWChemFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PCModelFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PDBFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PDBMLFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PMPFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.POVRayFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PQSChemFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PubChemASNFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PubChemFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.QChemFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.RawCopyFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.RGroupQueryFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.SDFFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.ShelXFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.SMARTSFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.SMILESFIXFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.SMILESFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.SpartanFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.SVGFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.SybylDescriptorFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.TinkerMM2Format
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.TinkerXYZFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.TurboMoleFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.UniChemXYZFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.VASPFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.ViewmolFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.XEDFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.XYZFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.YasaraFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.ZindoFormat
- getPreferredNameExtension() - Method in class org.openscience.cdk.io.formats.ZMatrixFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.ABINITFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.Aces2Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.ADFFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.AlchemyFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.BGFFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.BSFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CacaoCartesianFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CacaoInternalFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CACheFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CDKOWLFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CDKSourceCodeFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_1Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_2Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.ChemDrawFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.ChemtoolFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CIFFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CMLFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CMLRSSFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CRK2DFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CRK3DFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CrystClustFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.CTXFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.DaltonFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.DMol3Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.DOCK5Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.FenskeHall_ZMatrixFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.FingerprintFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.GamessFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.Gaussian03Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.Gaussian90Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.Gaussian92Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.Gaussian94Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.Gaussian95Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.Gaussian98Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.GaussianInputFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.GhemicalMMFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.GhemicalSPMFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.GROMOS96Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.HINFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.INChIFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.INChIPlainTextFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.JaguarFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.JMEFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MacroModelFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MDLFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MDLRXNFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MDLRXNV2000Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MDLRXNV3000Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MDLV2000Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MDLV3000Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MMODFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.Mol2Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MOPAC2002Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MOPAC2007Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MOPAC2009Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MOPAC2012Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MOPAC7Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MOPAC7InputFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MOPAC93Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MOPAC97Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MoSSOutputFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.MPQCFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.NWChemFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PCModelFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PDBFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PDBMLFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PMPFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PQSChemFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PubChemASNFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PubChemFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.QChemFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.RawCopyFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.RGroupQueryFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.SDFFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.ShelXFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.SMARTSFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.SMILESFIXFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.SMILESFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.SpartanFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.SybylDescriptorFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.TinkerMM2Format
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.TinkerXYZFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.TurboMoleFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.UniChemXYZFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.VASPFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.ViewmolFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.XEDFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.XYZFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.YasaraFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.ZindoFormat
- getReaderClassName() - Method in class org.openscience.cdk.io.formats.ZMatrixFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.ABINITFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.Aces2Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.ADFFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.AlchemyFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.BGFFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.BSFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CacaoCartesianFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CacaoInternalFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CACheFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CDKOWLFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CDKSourceCodeFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_1Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_2Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.ChemDrawFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.ChemtoolFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CIFFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CMLFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CMLRSSFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CRK2DFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CRK3DFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CrystClustFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.CTXFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.DaltonFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.DMol3Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.DOCK5Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.FenskeHall_ZMatrixFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.FingerprintFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.GamessFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian03Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian90Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian92Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian94Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian95Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian98Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.GaussianInputFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.GhemicalMMFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.GhemicalSPMFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.GROMOS96Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.HINFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.INChIFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.INChIPlainTextFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.JaguarFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.JMEFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MacroModelFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLRXNFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLRXNV2000Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLRXNV3000Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLV2000Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLV3000Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MMODFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.Mol2Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC2002Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC2007Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC2009Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC2012Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC7Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC7InputFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC93Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC97Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MoSSOutputFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.MPQCFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.NWChemFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PCModelFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PDBFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PDBMLFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PMPFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PQSChemFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemASNFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.QChemFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.RawCopyFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.RGroupQueryFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.SDFFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.ShelXFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.SMARTSFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.SMILESFIXFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.SMILESFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.SpartanFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.SybylDescriptorFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.TinkerMM2Format
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.TinkerXYZFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.TurboMoleFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.UniChemXYZFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.VASPFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.ViewmolFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.XEDFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.XYZFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.YasaraFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.ZindoFormat
- getRequiredDataFeatures() - Method in class org.openscience.cdk.io.formats.ZMatrixFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.ABINITFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.Aces2Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.ADFFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.AlchemyFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.BGFFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.BSFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CacaoCartesianFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CacaoInternalFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CACheFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CDKOWLFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CDKSourceCodeFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_1Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_2Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.ChemDrawFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.ChemtoolFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CIFFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CMLFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CMLRSSFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CRK2DFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CRK3DFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CrystClustFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.CTXFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.DaltonFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.DMol3Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.DOCK5Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.FenskeHall_ZMatrixFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.FingerprintFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.GamessFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian03Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian90Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian92Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian94Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian95Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.Gaussian98Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.GaussianInputFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.GhemicalMMFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.GhemicalSPMFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.GROMOS96Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.HINFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.INChIFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.INChIPlainTextFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.JaguarFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.JMEFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MacroModelFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLRXNFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLRXNV2000Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLRXNV3000Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLV2000Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MDLV3000Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MMODFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.Mol2Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC2002Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC2007Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC2009Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC2012Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC7Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC7InputFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC93Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MOPAC97Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MoSSOutputFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.MPQCFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.NWChemFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PCModelFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PDBFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PDBMLFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PMPFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PQSChemFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemASNFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.QChemFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.RawCopyFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.RGroupQueryFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.SDFFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.ShelXFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.SMARTSFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.SMILESFIXFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.SMILESFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.SpartanFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.SybylDescriptorFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.TinkerMM2Format
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.TinkerXYZFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.TurboMoleFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.UniChemXYZFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.VASPFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.ViewmolFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.XEDFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.XYZFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.YasaraFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.ZindoFormat
- getSupportedDataFeatures() - Method in class org.openscience.cdk.io.formats.ZMatrixFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.ABINITFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.Aces2Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.ADFFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.AlchemyFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.BGFFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.BSFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CacaoCartesianFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CacaoInternalFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CACheFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CDKOWLFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CDKSourceCodeFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_1Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_2Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.ChemDrawFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.ChemtoolFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CIFFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CMLFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CMLRSSFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CRK2DFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CRK3DFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CrystClustFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.CTXFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.DaltonFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.DMol3Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.DOCK5Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.FenskeHall_ZMatrixFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.FingerprintFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.GamessFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.Gaussian03Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.Gaussian90Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.Gaussian92Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.Gaussian94Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.Gaussian95Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.Gaussian98Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.GaussianInputFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.GhemicalMMFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.GhemicalSPMFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.GROMOS96Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.HINFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.INChIFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.INChIPlainTextFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.JaguarFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.JMEFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MacroModelFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MDLFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MDLRXNFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MDLRXNV2000Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MDLRXNV3000Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MDLV2000Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MDLV3000Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MMODFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.Mol2Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MOPAC2002Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MOPAC2007Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MOPAC2009Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MOPAC2012Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MOPAC7Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MOPAC7InputFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MOPAC93Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MOPAC97Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MoSSOutputFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.MPQCFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.NWChemFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PCModelFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PDBFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PDBMLFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PMPFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PQSChemFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PubChemASNFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PubChemFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.QChemFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.RawCopyFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.RGroupQueryFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.SDFFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.ShelXFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.SMARTSFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.SMILESFIXFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.SMILESFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.SpartanFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.SybylDescriptorFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.TinkerMM2Format
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.TinkerXYZFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.TurboMoleFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.UniChemXYZFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.VASPFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.ViewmolFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.XEDFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.XYZFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.YasaraFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.ZindoFormat
- getWriterClassName() - Method in class org.openscience.cdk.io.formats.ZMatrixFormat
- GhemicalMMFormat - Class in org.openscience.cdk.io.formats
-
See here.
- GhemicalMMFormat() - Constructor for class org.openscience.cdk.io.formats.GhemicalMMFormat
- GhemicalSPMFormat - Class in org.openscience.cdk.io.formats
- GhemicalSPMFormat() - Constructor for class org.openscience.cdk.io.formats.GhemicalSPMFormat
- GROMOS96Format - Class in org.openscience.cdk.io.formats
-
See here.
- GROMOS96Format() - Constructor for class org.openscience.cdk.io.formats.GROMOS96Format
- guessFormat(InputStream) - Method in class org.openscience.cdk.io.FormatFactory
- guessFormat(Reader) - Method in class org.openscience.cdk.io.FormatFactory
-
Creates a String of the Class name of the
IChemObjectreader for this file format.
H
- HAS_2D_COORDINATES - Static variable in class org.openscience.cdk.tools.DataFeatures
- HAS_3D_COORDINATES - Static variable in class org.openscience.cdk.tools.DataFeatures
- HAS_ATOM_ELEMENT_SYMBOL - Static variable in class org.openscience.cdk.tools.DataFeatures
- HAS_ATOM_FORMAL_CHARGES - Static variable in class org.openscience.cdk.tools.DataFeatures
- HAS_ATOM_HYBRIDIZATIONS - Static variable in class org.openscience.cdk.tools.DataFeatures
-
FIXME: NOT YET IN BODF !!!
- HAS_ATOM_ISOTOPE_NUMBERS - Static variable in class org.openscience.cdk.tools.DataFeatures
- HAS_ATOM_MASS_NUMBERS - Static variable in class org.openscience.cdk.tools.DataFeatures
- HAS_ATOM_PARTIAL_CHARGES - Static variable in class org.openscience.cdk.tools.DataFeatures
- HAS_DIETZ_REPRESENTATION - Static variable in class org.openscience.cdk.tools.DataFeatures
- HAS_FRACTIONAL_CRYSTAL_COORDINATES - Static variable in class org.openscience.cdk.tools.DataFeatures
- HAS_GRAPH_REPRESENTATION - Static variable in class org.openscience.cdk.tools.DataFeatures
- HAS_REACTIONS - Static variable in class org.openscience.cdk.tools.DataFeatures
-
FIXME: NOT YET IN BODF !!!
- HAS_UNITCELL_PARAMETERS - Static variable in class org.openscience.cdk.tools.DataFeatures
-
FIXME: NOT YET IN BODF !!!
- hashCode() - Method in class org.openscience.cdk.io.formats.AbstractResourceFormat
- HINFormat - Class in org.openscience.cdk.io.formats
-
See here.
- HINFormat() - Constructor for class org.openscience.cdk.io.formats.HINFormat
I
- INChIFormat - Class in org.openscience.cdk.io.formats
-
See here.
- INChIFormat() - Constructor for class org.openscience.cdk.io.formats.INChIFormat
- INChIPlainTextFormat - Class in org.openscience.cdk.io.formats
- INChIPlainTextFormat() - Constructor for class org.openscience.cdk.io.formats.INChIPlainTextFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.ABINITFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.Aces2Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.ADFFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.AlchemyFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.BGFFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.BSFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CacaoCartesianFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CacaoInternalFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CACheFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CDKOWLFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CDKSourceCodeFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_1Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.Chem3D_Cartesian_2Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.ChemDrawFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.ChemtoolFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CIFFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CMLFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CMLRSSFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CRK2DFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CRK3DFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CrystClustFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.CTXFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.DaltonFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.DMol3Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.DOCK5Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.FenskeHall_ZMatrixFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.FingerprintFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.GamessFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.Gaussian03Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.Gaussian90Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.Gaussian92Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.Gaussian94Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.Gaussian95Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.Gaussian98Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.GaussianInputFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.GhemicalMMFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.GhemicalSPMFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.GROMOS96Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.HINFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.INChIFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.INChIPlainTextFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.JaguarFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.JMEFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MacroModelFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MDLFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MDLRXNFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MDLRXNV2000Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MDLRXNV3000Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MDLV2000Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MDLV3000Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MMODFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.Mol2Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MOPAC2002Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MOPAC2007Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MOPAC2009Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MOPAC2012Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MOPAC7Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MOPAC7InputFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MOPAC93Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MOPAC97Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MoSSOutputFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.MPQCFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.NWChemFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PCModelFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PDBFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PDBMLFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PMPFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.POVRayFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PQSChemFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PubChemASNFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PubChemFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.QChemFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.RawCopyFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.RGroupQueryFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.SDFFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.ShelXFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.SMARTSFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.SMILESFIXFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.SMILESFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.SpartanFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.SVGFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.SybylDescriptorFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.TinkerMM2Format
- isXMLBased() - Method in class org.openscience.cdk.io.formats.TinkerXYZFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.TurboMoleFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.UniChemXYZFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.VASPFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.ViewmolFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.XEDFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.XYZFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.YasaraFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.ZindoFormat
- isXMLBased() - Method in class org.openscience.cdk.io.formats.ZMatrixFormat
J
- JaguarFormat - Class in org.openscience.cdk.io.formats
-
See here.
- JaguarFormat() - Constructor for class org.openscience.cdk.io.formats.JaguarFormat
- JMEFormat - Class in org.openscience.cdk.io.formats
- JMEFormat() - Constructor for class org.openscience.cdk.io.formats.JMEFormat
M
- MacroModelFormat - Class in org.openscience.cdk.io.formats
- MacroModelFormat() - Constructor for class org.openscience.cdk.io.formats.MacroModelFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.ABINITFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.Aces2Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.ADFFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.CACheFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.CDKOWLFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.CIFFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.CMLFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.CrystClustFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.CTXFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.DaltonFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.GamessFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.Gaussian03Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.Gaussian90Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.Gaussian92Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.Gaussian94Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.Gaussian95Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.Gaussian98Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.GhemicalMMFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.GhemicalSPMFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.HINFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.INChIFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.INChIPlainTextFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.JaguarFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MDLFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MDLRXNFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MDLRXNV3000Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MDLV2000Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MDLV3000Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.Mol2Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MOPAC2002Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MOPAC2007Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MOPAC2009Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MOPAC2012Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MOPAC7Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MOPAC7InputFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MOPAC93Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MOPAC97Format
- matches(int, String) - Method in class org.openscience.cdk.io.formats.MoSSOutputFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.NWChemFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.PDBFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.PMPFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.PubChemASNFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.QChemFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.RGroupQueryFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.SDFFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.ShelXFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.SpartanFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.VASPFormat
- matches(int, String) - Method in class org.openscience.cdk.io.formats.ZMatrixFormat
- matches(List<String>) - Method in class org.openscience.cdk.io.formats.MDLRXNV2000Format
- matches(List<String>) - Method in class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- matches(List<String>) - Method in class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
- MDLFormat - Class in org.openscience.cdk.io.formats
-
See here.
- MDLFormat() - Constructor for class org.openscience.cdk.io.formats.MDLFormat
- MDLRXNFormat - Class in org.openscience.cdk.io.formats
-
See here.
- MDLRXNFormat() - Constructor for class org.openscience.cdk.io.formats.MDLRXNFormat
- MDLRXNV2000Format - Class in org.openscience.cdk.io.formats
-
See here.
- MDLRXNV2000Format() - Constructor for class org.openscience.cdk.io.formats.MDLRXNV2000Format
- MDLRXNV3000Format - Class in org.openscience.cdk.io.formats
-
See here.
- MDLRXNV3000Format() - Constructor for class org.openscience.cdk.io.formats.MDLRXNV3000Format
- MDLV2000Format - Class in org.openscience.cdk.io.formats
- MDLV2000Format() - Constructor for class org.openscience.cdk.io.formats.MDLV2000Format
- MDLV3000Format - Class in org.openscience.cdk.io.formats
- MDLV3000Format() - Constructor for class org.openscience.cdk.io.formats.MDLV3000Format
- MMODFormat - Class in org.openscience.cdk.io.formats
-
See here.
- MMODFormat() - Constructor for class org.openscience.cdk.io.formats.MMODFormat
- Mol2Format - Class in org.openscience.cdk.io.formats
-
See here.
- Mol2Format() - Constructor for class org.openscience.cdk.io.formats.Mol2Format
- MOPAC2002Format - Class in org.openscience.cdk.io.formats
- MOPAC2002Format() - Constructor for class org.openscience.cdk.io.formats.MOPAC2002Format
- MOPAC2007Format - Class in org.openscience.cdk.io.formats
- MOPAC2007Format() - Constructor for class org.openscience.cdk.io.formats.MOPAC2007Format
- MOPAC2009Format - Class in org.openscience.cdk.io.formats
- MOPAC2009Format() - Constructor for class org.openscience.cdk.io.formats.MOPAC2009Format
- MOPAC2012Format - Class in org.openscience.cdk.io.formats
- MOPAC2012Format() - Constructor for class org.openscience.cdk.io.formats.MOPAC2012Format
- MOPAC7Format - Class in org.openscience.cdk.io.formats
- MOPAC7Format() - Constructor for class org.openscience.cdk.io.formats.MOPAC7Format
- MOPAC7InputFormat - Class in org.openscience.cdk.io.formats
- MOPAC7InputFormat() - Constructor for class org.openscience.cdk.io.formats.MOPAC7InputFormat
- MOPAC93Format - Class in org.openscience.cdk.io.formats
- MOPAC93Format() - Constructor for class org.openscience.cdk.io.formats.MOPAC93Format
- MOPAC97Format - Class in org.openscience.cdk.io.formats
- MOPAC97Format() - Constructor for class org.openscience.cdk.io.formats.MOPAC97Format
- MoSSOutputFormat - Class in org.openscience.cdk.io.formats
- MoSSOutputFormat() - Constructor for class org.openscience.cdk.io.formats.MoSSOutputFormat
- MPQCFormat - Class in org.openscience.cdk.io.formats
-
See here.
- MPQCFormat() - Constructor for class org.openscience.cdk.io.formats.MPQCFormat
N
- NONE - Static variable in class org.openscience.cdk.tools.DataFeatures
-
Indicated that no feature are defined.
- NWChemFormat - Class in org.openscience.cdk.io.formats
-
See here.
- NWChemFormat() - Constructor for class org.openscience.cdk.io.formats.NWChemFormat
O
- org.openscience.cdk.io - package org.openscience.cdk.io
- org.openscience.cdk.io.formats - package org.openscience.cdk.io.formats
- org.openscience.cdk.tools - package org.openscience.cdk.tools
P
- PCModelFormat - Class in org.openscience.cdk.io.formats
-
See here.
- PCModelFormat() - Constructor for class org.openscience.cdk.io.formats.PCModelFormat
- PDBFormat - Class in org.openscience.cdk.io.formats
-
See here.
- PDBFormat() - Constructor for class org.openscience.cdk.io.formats.PDBFormat
- PDBMLFormat - Class in org.openscience.cdk.io.formats
-
XML version of the PDB format.
- PDBMLFormat() - Constructor for class org.openscience.cdk.io.formats.PDBMLFormat
- PMPFormat - Class in org.openscience.cdk.io.formats
- PMPFormat() - Constructor for class org.openscience.cdk.io.formats.PMPFormat
- POVRayFormat - Class in org.openscience.cdk.io.formats
-
See here.
- POVRayFormat() - Constructor for class org.openscience.cdk.io.formats.POVRayFormat
- PQSChemFormat - Class in org.openscience.cdk.io.formats
-
See here.
- PQSChemFormat() - Constructor for class org.openscience.cdk.io.formats.PQSChemFormat
- PubChemASNFormat - Class in org.openscience.cdk.io.formats
- PubChemASNFormat() - Constructor for class org.openscience.cdk.io.formats.PubChemASNFormat
- PubChemCompoundsXMLFormat - Class in org.openscience.cdk.io.formats
- PubChemCompoundsXMLFormat() - Constructor for class org.openscience.cdk.io.formats.PubChemCompoundsXMLFormat
- PubChemCompoundXMLFormat - Class in org.openscience.cdk.io.formats
- PubChemCompoundXMLFormat() - Constructor for class org.openscience.cdk.io.formats.PubChemCompoundXMLFormat
- PubChemFormat - Class in org.openscience.cdk.io.formats
-
See here.
- PubChemFormat() - Constructor for class org.openscience.cdk.io.formats.PubChemFormat
- PubChemSubstancesASNFormat - Class in org.openscience.cdk.io.formats
- PubChemSubstancesASNFormat() - Constructor for class org.openscience.cdk.io.formats.PubChemSubstancesASNFormat
- PubChemSubstancesXMLFormat - Class in org.openscience.cdk.io.formats
- PubChemSubstancesXMLFormat() - Constructor for class org.openscience.cdk.io.formats.PubChemSubstancesXMLFormat
- PubChemSubstanceXMLFormat - Class in org.openscience.cdk.io.formats
- PubChemSubstanceXMLFormat() - Constructor for class org.openscience.cdk.io.formats.PubChemSubstanceXMLFormat
Q
- QChemFormat - Class in org.openscience.cdk.io.formats
-
See here.
- QChemFormat() - Constructor for class org.openscience.cdk.io.formats.QChemFormat
R
- RawCopyFormat - Class in org.openscience.cdk.io.formats
-
See here.
- RawCopyFormat() - Constructor for class org.openscience.cdk.io.formats.RawCopyFormat
- registerFormat(IChemFormatMatcher) - Method in class org.openscience.cdk.io.FormatFactory
-
Registers a format for detection.
- RGroupQueryFormat - Class in org.openscience.cdk.io.formats
-
Format for Symyx RGfiles (Rgroup query files).
- RGroupQueryFormat() - Constructor for class org.openscience.cdk.io.formats.RGroupQueryFormat
S
- SDFFormat - Class in org.openscience.cdk.io.formats
-
See here.
- SDFFormat() - Constructor for class org.openscience.cdk.io.formats.SDFFormat
- ShelXFormat - Class in org.openscience.cdk.io.formats
-
See here.
- ShelXFormat() - Constructor for class org.openscience.cdk.io.formats.ShelXFormat
- SMARTSFormat - Class in org.openscience.cdk.io.formats
-
See here.
- SMARTSFormat() - Constructor for class org.openscience.cdk.io.formats.SMARTSFormat
- SMILESFIXFormat - Class in org.openscience.cdk.io.formats
- SMILESFIXFormat() - Constructor for class org.openscience.cdk.io.formats.SMILESFIXFormat
- SMILESFormat - Class in org.openscience.cdk.io.formats
-
See here.
- SMILESFormat() - Constructor for class org.openscience.cdk.io.formats.SMILESFormat
- SpartanFormat - Class in org.openscience.cdk.io.formats
- SpartanFormat() - Constructor for class org.openscience.cdk.io.formats.SpartanFormat
- SVGFormat - Class in org.openscience.cdk.io.formats
- SVGFormat() - Constructor for class org.openscience.cdk.io.formats.SVGFormat
- SybylDescriptorFormat - Class in org.openscience.cdk.io.formats
-
See here.
- SybylDescriptorFormat() - Constructor for class org.openscience.cdk.io.formats.SybylDescriptorFormat
T
- TinkerMM2Format - Class in org.openscience.cdk.io.formats
-
See here.
- TinkerMM2Format() - Constructor for class org.openscience.cdk.io.formats.TinkerMM2Format
- TinkerXYZFormat - Class in org.openscience.cdk.io.formats
-
See here.
- TinkerXYZFormat() - Constructor for class org.openscience.cdk.io.formats.TinkerXYZFormat
- TurboMoleFormat - Class in org.openscience.cdk.io.formats
-
See here.
- TurboMoleFormat() - Constructor for class org.openscience.cdk.io.formats.TurboMoleFormat
U
- UniChemXYZFormat - Class in org.openscience.cdk.io.formats
- UniChemXYZFormat() - Constructor for class org.openscience.cdk.io.formats.UniChemXYZFormat
V
- VASPFormat - Class in org.openscience.cdk.io.formats
- VASPFormat() - Constructor for class org.openscience.cdk.io.formats.VASPFormat
- ViewmolFormat - Class in org.openscience.cdk.io.formats
-
See here.
- ViewmolFormat() - Constructor for class org.openscience.cdk.io.formats.ViewmolFormat
X
- XEDFormat - Class in org.openscience.cdk.io.formats
- XEDFormat() - Constructor for class org.openscience.cdk.io.formats.XEDFormat
- XYZFormat - Class in org.openscience.cdk.io.formats
- XYZFormat() - Constructor for class org.openscience.cdk.io.formats.XYZFormat
Y
- YasaraFormat - Class in org.openscience.cdk.io.formats
-
See here.
- YasaraFormat() - Constructor for class org.openscience.cdk.io.formats.YasaraFormat
Z
- ZindoFormat - Class in org.openscience.cdk.io.formats
-
See here.
- ZindoFormat() - Constructor for class org.openscience.cdk.io.formats.ZindoFormat
- ZMatrixFormat - Class in org.openscience.cdk.io.formats
- ZMatrixFormat() - Constructor for class org.openscience.cdk.io.formats.ZMatrixFormat
All Classes All Packages