Package org.openscience.cdk.io.formats

Class PDBFormat

java.lang.Object

org.openscience.cdk.io.formats.AbstractResourceFormat

org.openscience.cdk.io.formats.PDBFormat

All Implemented Interfaces:

IChemFormat, IChemFormatMatcher, IResourceFormat

public class PDBFormat
extends AbstractResourceFormat
implements IChemFormatMatcher

See here.

Source code:

main

Belongs to CDK module:

ioformats

Nested Class Summary

Nested classes/interfaces inherited from interface org.openscience.cdk.io.formats.IChemFormatMatcher

IChemFormatMatcher.MatchResult

Field Summary

Fields inherited from interface org.openscience.cdk.io.formats.IChemFormatMatcher

NO_MATCH

Constructor Summary

Constructors

Constructor	Description
PDBFormat()

Method Summary

Modifier and Type	Method	Description
String	getFormatName()
static IResourceFormat	getInstance()
String	getMIMEType()
String[]	getNameExtensions()
String	getPreferredNameExtension()
String	getReaderClassName()
int	getRequiredDataFeatures()
int	getSupportedDataFeatures()
String	getWriterClassName()
boolean	isXMLBased()
boolean	matches(int lineNumber, String line)
IChemFormatMatcher.MatchResult	matches(List<String> lines)	Simple implementation, runs the lines one-by-one through matches(int, String) and returns true if any line matches.

Methods inherited from class org.openscience.cdk.io.formats.AbstractResourceFormat

equals, hashCode

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.openscience.cdk.io.formats.IChemFormatMatcher

matches

Constructor Detail

PDBFormat

public PDBFormat()

Method Detail

getInstance

public static IResourceFormat getInstance()

getFormatName

public String getFormatName()

Specified by:

getFormatName in interface IResourceFormat

getMIMEType

public String getMIMEType()

Specified by:

getMIMEType in interface IResourceFormat

getPreferredNameExtension

public String getPreferredNameExtension()

Specified by:

getPreferredNameExtension in interface IResourceFormat

getNameExtensions

public String[] getNameExtensions()

Specified by:

getNameExtensions in interface IResourceFormat

getReaderClassName

public String getReaderClassName()

Specified by:

getReaderClassName in interface IChemFormat

getWriterClassName

public String getWriterClassName()

Specified by:

getWriterClassName in interface IChemFormat

matches

public boolean matches(int lineNumber,
                       String line)

isXMLBased

public boolean isXMLBased()

Specified by:

isXMLBased in interface IResourceFormat

getSupportedDataFeatures

public int getSupportedDataFeatures()

Specified by:

getSupportedDataFeatures in interface IChemFormat

getRequiredDataFeatures

public int getRequiredDataFeatures()

Specified by:

getRequiredDataFeatures in interface IChemFormat

matches

public final IChemFormatMatcher.MatchResult matches(List<String> lines)

Simple implementation, runs the lines one-by-one through matches(int, String) and returns true if any line matches.

Specified by:

matches in interface IChemFormatMatcher

Parameters:

lines - lines of the input to be checked

Returns:

runs the lines